Al Qaeda 2006: Fighting in Iraq, regrouping in Afghanistan, enlisting in Europe

Al Qaeda in Iraq is small but vicious, says Gunaratna. It was linked to the February bombing of a Shiite shrine in Samarra – the impact of which ratcheted up sectarian killings in 2006.

In January, the UN said that more than 34,000 Iraqi civilians were killed last year, most in Sunni-Shiite violence that Al Qaeda is bent on fomenting.

In September 2006, President Pervez Musharraf arranged his most recent peace deal with pro-Taliban militants in Pakistan's remote Federally Administered Tribal Areas along the Afghan border. Mr. Musharraf's peace-brokering, critics warn, has allowed the Taliban to move freely between Afghanistan and Pakistan. John Negroponte, the first director of national intelligence who is expected to be confirmed as deputy secretary of state, said that the deal is allowing Al Qaeda operatives to reorganize in the area and to cultivate "stronger operational connections and relationships that radiate outward from their leaders' secure hideout in Pakistan to affiliates throughout the Middle East, North Africa, and Europe."

In March, Israel for the first time charged two Palestinians for being members of a group possibly connected to Al Qaeda. Journalist kidnappings raised concerns that the group was infiltrating the territory or inspiring copycats.

The Philippine military killed two top members of the Al Qaeda-linked militant group Abu Sayyaf. Military officials say that the killing of the group's leader, Khadaffy Janjalani, in September 2006, and his deputy Abu Sulaiman, who was killed in January 2007, have rendered the group ineffective. Still, US-trained Philippine soldiers continue to regularly engage Abu Sayyaf militants.

In February, Saudi Arabia thwarted a bombing on an oil-processing plant. Raids and gun battles throughout the country netted more than 100 suspected Al Qaeda militants, but US officials have said that the kingdom could do more to curb terrorism, including stopping the flow of militants and funds across its borders.

In June, Islamists suspected of harboring key Al Qaeda operatives overran Mogadishu and took over most of the country except Baidoa, the seat of a weak transitional government. US-backed warlords could not stop the Union of Islamic Courts, which denies charges of ties with Al Qaeda. The country saw its first suicide bombing – which Somali officials blamed on Al Qaeda – on Sept. 19, a failed attempt to kill the interim president. The Islamists fled in the wake of an Ethiopian and Somali offensive that began Dec. 26.

North America saw no Al Qaeda attacks. American security forces working around the world have seen "an awful lot of victories," says Arnaud de Borchgrave, director of the Transnational Threats Project at the Center for Strategic and International Studies in Washington. "The CIA has carte blanche to track terrorists around the world," he says. Critics say that this has led to the use of secret prisons used to interrogate Al Qaeda suspects.

On the domestic front, officials say that they thwarted attacks on Chicago's Sears Tower and New York's transit system over the summer and arrested several people in the process – although it was unclear how serious such plans were.

Yemen prevented bomb attacks at two oil facilities on Sept. 15 that were, according to intelligence consulting firm Stratfor, probably commissioned by Al Qaeda. Twenty-three suspected Al Qaeda fighters escaped from prison in February. The government killed or captured many of them, but officials say that those remaining may help Al Qaeda in Yemen to regroup.

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